gtda.graphs: Graphs

The module gtda.graphs implements transformers to create graphs or extract metric spaces from graphs.

Graph creation

graphs.TransitionGraph([func, func_params, …])

Undirected transition graphs from arrays of time-evolving states.

graphs.KNeighborsGraph([n_neighbors, mode, …])

Adjacency matrices of \(k\)-nearest neighbor graphs.

Graph processing

graphs.GraphGeodesicDistance([n_jobs, …])

Distance matrices arising from geodesic distances on graphs.